In Folder Options you are required to specify the Input Folder and Output Folder.
Input Folder is a folder monitored by the AFP2PDF Transform Server program, and once an AFP file is found in this folder, it will be taken out for processing. After it is transformed by the AFP2PDF server it turns out to be an Adobe PDF file, and will be placed in the Output Folder.
Keep tree structure for PDF files: this option enables the output PDF files to be created with hierarchical folder structure in the target folder.
Delete PDF file after conversion: the source AFP file will be deleted once it is converted to Adobe PDF file.
Enable logging: Specify a log file, and analyze logged key events in the log file.